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beagle

Genotype calling, genotype phasing and imputation of ungenotyped markers

Description

Beagle performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Genotypic imputation works on phased haplotypes using a Li and Stephens haplotype frequency model. Beagle also implements the Refined IBD algorithm for detecting homozygosity-by-descent (HBD) and identity-by-descent (IBD) segments.

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Homepage

https://faculty.washington.edu/browning/beagle/beagle.html


Statistics

634 other people were interested in this package here. The newest known version of this software is 4.1~170608+dfsg-2 (Information last updated 1 day ago.)