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cufflinks

Transcript assembly, differential expression and regulation for RNA-Seq

Description

Cufflinks assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples. It accepts aligned RNA-Seq reads and assembles the alignments into a parsimonious set of transcripts. Cufflinks then estimates the relative abundances of these transcripts based on how many reads support each one.

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Homepage

http://cufflinks.cbcb.umd.edu


Statistics

983 other people were interested in this package here. The newest known version of this software is 2.2.1-3+b1 (Information last updated about 8 hours ago.)