libbio-db-refseq-perl

Database object interface for RefSeq retrieval

Description

Allows the dynamic retrieval of sequence objects Bio::Seq from the RefSeq nucleotide database using the dbfetch script at EBI:

http://www.ebi.ac.uk/Tools/dbfetch/dbfetch

At this time the module specifically retrieves nucleotide sequences only.

In order to make changes transparent host type (currently only ebi) and location (defaults to ebi) were separated out. This allows later additions of more servers in different geographical locations.

The functionality of this module is inherited from Bio::DB::DBFetch which implements Bio::DB::WebDBSeqI.

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Homepage

https://metacpan.org/release/Bio-DB-RefSeq


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Install libbio-db-refseq-perl