proftmb

per-residue prediction of bacterial transmembrane beta barrels

Description

proftmb predicts transmembrane beta-barrel (TMB) proteins in Gram-negative bacteria.

For each query protein, proftmb provides both a Z-value indicating that the protein actually contains a membrane barrel, and a four-state per-residue labeling of upward- and downward-facing strands, periplasmic hairpins and extracellular loops.

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Homepage

https://rostlab.org/


Install this software package

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Install proftmb