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samtools

processing sequence alignments in SAM and BAM formats

processing sequence alignments in SAM and BAM formats
from version 0.1.19-1

Description

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) format, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM (not SAM) file on a remote FTP or HTTP server.

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Homepage

http://www.htslib.org/


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104 other people were interested in this package here. The newest known version of this software is 1.3.1-2 (Information last updated about 9 hours ago.)