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tree-ppuzzle

Parallelized reconstruction of phylogenetic trees by maximum likelihood

Description

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

This is the parallelized version of tree-puzzle.

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Homepage

http://www.tree-puzzle.de


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128 other people were interested in this package here. The newest known version of this software is 5.2-8+b1 (Information last updated about 6 hours ago.)