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trinityrnaseq-examples

RNA-Seq De novo Assembly common example and testing files

Description

Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-seq reads. Trinity partitions the sequence data into many individual de Bruijn graphs, each representing the transcriptional complexity at a given gene or locus, and then processes each graph independently to extract full-length splicing isoforms and to tease apart transcripts derived from paralogous genes.

This package contains testing & example files.

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Homepage

http://trinityrnaseq.github.io/


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143 other people were interested in this package here. The newest known version of this software is 2.2.0+dfsg-4 (Information last updated 4 days ago.)