abacas-examples

sample data for abacas to close gaps in genomic alignments

Description

ABACAS (Algorithm Based Automatic Contiguation of Assembled Sequences) intends to rapidly contiguate (align, order, orientate), visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequence.

This package contains a test data set as well as sample scripts running some test suite provided by Debian also as autopkgtest.

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Homepage

http://abacas.sourceforge.net/


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