NGS copy number algorithms
DescriptionSupport code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings). The alleleCount package primarily exists to prevent code duplication between some other projects, specifically AscatNGS and Battenberg.
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Install this software package
If the package is available for the distribution you are currently using on your computer then install the software by clicking on…Install allelecount