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arden

specificity control for read alignments using an artificial reference

Description

ARDEN (Artificial Reference Driven Estimation of false positives in NGS data) is a novel benchmark that estimates error rates based on real experimental reads and an additionally generated artificial reference genome. It allows the computation of error rates specifically for a dataset and the construction of a ROC-curve. Thereby, it can be used to optimize parameters for read mappers, to select read mappers for a specific problem or also to filter alignments based on quality estimation.

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Homepage

http://sourceforge.net/projects/arden/


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398 other people were interested in this package here. The newest known version of this software is 1.0-3 (Information last updated about 17 hours ago.)