augur

pipeline components for real-time virus analysis

Description

The nextstrain project is an attempt to make flexible informatic pipelines and visualization tools to track ongoing pathogen evolution as sequence data emerges. The nextstrain project derives from nextflu, which was specific to influenza evolution.

nextstrain is comprised of three components:

  * fauna: database and IO scripts for sequence and serological data
  * augur: informatic pipelines to conduct inferences from raw data
  * auspice: web app to visualize resulting inferences

Upload more screenshots

Please help extend the collection of screenshots. Just make a screenshot and upload it here. You don't need to register or anything.

Upload a screenshot

Hint: upload an image here from your clipboard with Ctrl-V


Homepage

https://github.com/nextstrain/augur


Install this software package

If the package is available for the distribution you are currently using on your computer then install the software by clicking on…

Install augur