Debian logoDebian Screenshots >

bowtie2

ultrafast memory-efficient short read aligner

Description

is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes.

Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes

Upload more screenshots

Please help extend the collection of screenshots. Just make a screenshot and upload it here. You don't need to register or anything.


Homepage

http://bowtie-bio.sourceforge.net/bowtie2


Statistics

2422 other people were interested in this package here. The newest known version of this software is 2.3.4.3-1 (Information last updated about 6 hours ago.)