chromimpute

Large-scale systematic epigenome imputation

Description

ChromImpute takes an existing compendium of epigenomic data and uses it to predict signal tracks for mark-sample combinations not experimentally mapped or to generate a potentially more robust version of data sets that have been mapped experimentally. ChromImpute bases its predictions on features from signal tracks of other marks that have been mapped in the target sample and the target mark in other samples with these features combined using an ensemble of regression trees.

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Homepage

https://www.biolchem.ucla.edu/labs/ernst/ChromImpute/


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