covtobed-examples

example data and scripts for mindthegap

Description

Reads one (or more) alignment files (sorted BAM) and prints a BED with the coverage. It will join consecutive bases with the same coverage, and can be used to only print a BED file with the regions having a specific coverage range.

This package is meant to accommodate covtobed.

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Homepage

https://github.com/telatin/covtobed


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Install covtobed-examples