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cutadapt

Clean biological sequences from high-throughput sequencing reads

Description

Cutadapt helps with biological sequence clean tasks by finding the adapter or primer sequences in an error-tolerant way. It can also modify and filter reads in various ways. Adapter sequences can contain IUPAC wildcard characters. Also, paired-end reads and even colorspace data is supported. If you want, you can also just demultiplex your input data, without removing adapter sequences at all.

This package contains the user interface.

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Homepage

http://pypi.python.org/pypi/cutadapt


Statistics

671 other people were interested in this package here. The newest known version of this software is 1.18-1 (Information last updated about 23 hours ago.)