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tool for clustering millions of short DNA sequences


dnaclust is a tool for clustering large number of short DNA sequences. The clusters are created in such a way that the "radius" of each clusters is no more than the specified threshold.

The input sequences to be clustered should be in Fasta format. The id of each sequence is based on the first word of the seqeunce in the Fasta format. The first word is the prefix of the header up to the first occurance of white space characters in the header.

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1613 other people were interested in this package here. The newest known version of this software is 3-7+b1 (Information last updated 8 minutes ago.)