tool for assembling Illumina short reads in small regions
DescriptionFml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.
632 other people were interested in this package here. The newest known version of this software is 0.1-5+b1 (Information last updated 3 days ago.)
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