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hmmer2

profile hidden Markov models for protein sequence analysis

Description

HMMER is an implementation of profile hidden Markov model methods for sensitive searches of biological sequence databases using multiple sequence alignments as queries.

Given a multiple sequence alignment as input, HMMER builds a statistical model called a "hidden Markov model" which can then be used as a query into a sequence database to find (and/or align) additional homologues of the sequence family.

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Homepage

http://hmmer.janelia.org/


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737 other people were interested in this package here. The newest known version of this software is 2.3.2+dfsg-6 (Information last updated about 2 hours ago.)