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jmodeltest

HPC selection of models of nucleotide substitution

Description

jModelTest is a tool to carry out statistical selection of best-fit models of nucleotide substitution. It implements five different model selection strategies: hierarchical and dynamical likelihood ratio tests (hLRT and dLRT), Akaike and Bayesian information criteria (AIC and BIC), and a decision theory method (DT). It also provides estimates of model selection uncertainty, parameter importances and model-averaged parameter estimates, including model-averaged tree topologies. jModelTest 2 includes High Performance Computing (HPC) capabilities and additional features like new strategies for tree optimization, model- averaged phylogenetic trees (both topology and branch length), heuristic filtering and automatic logging of user activity.

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Homepage

https://github.com//ddarriba/jmodeltest2


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757 other people were interested in this package here. The newest known version of this software is 2.1.10+dfsg-6 (Information last updated about 1 hour ago.)