interface to call Heng Li's bwa mem aligner from Java code (jni)


BWA (Burrows-Wheeler Aligner) is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It is written in C.

gatk-bwamem provides a Java library and a shared library to allow one to use BWA from Java code.

This package contains the native library.

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