libstatgen1

processing and analyzing next generation sequencing and genotyping data library

Description

libStatGen is a library for statistical genetic programs. It includes some: A. General Operation Classes including: File/Stream I/O, String processing

and Parameter Parsing.

B. Statistical Genetic Specific Classes including: Handling Common file

formats (Accessors to get/set values, Indexed access to BAM files) and

some utility classes, including: 1. Cigar: interpretation and mapping

between query and reference. 2. Pileup: structured access to data by

individual reference position.

This package provides the shared library.

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Homepage

https://genome.sph.umich.edu/wiki/C++_Library:_libStatGen

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