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poa

Partial Order Alignment for multiple sequence alignment

Partial Order Alignment for multiple sequence alignment
from version 2.0+20060928-3

Description

POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW.

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Homepage

http://poamsa.sourceforge.net/


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1221 other people were interested in this package here. The newest known version of this software is 2.0+20060928-7 (Information last updated about 15 hours ago.)