# python3-nanomath

## simple math function for other Oxford Nanopore processing scripts

Description

This Python3 module provides a few simple math and statistics functions for other scripts processing Oxford Nanopore sequencing data. * Calculate read N50 from a set of lengths get_N50(readlenghts)

* Remove extreme length outliers from a dataset

remove_length_outliers(dataframe, columname)

* Calculate the average Phred quality of a read ave_qual(qualscores)

* Write out the statistics report after calling readstats function

write_stats(dataframe, outputname)

* Compute a number of statistics, return a dictionary

calc_read_stats(dataframe)

Upload more screenshots

Please help extend the collection of screenshots. Just make a screenshot and upload it here. You don't need to register or anything.

Upload a screenshot*Hint: upload an image here from your clipboard with Ctrl-V*

Homepage

https://github.com/wdecoster/nanomath

Install this software package

If the package is available for the distribution you are currently using on your computer then install the software by clicking onâ€¦

Install python3-nanomath