demultiplexing Oxford Nanopore reads from FASTQ files (examples)
DescriptionQcat is a command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files. It accepts basecalled FASTQ files and splits the reads into separate FASTQ files based on their barcode. Qcat makes the demultiplexing algorithms used in albacore/guppy and EPI2ME available to be used locally with FASTQ files. Currently qcat implements the EPI2ME algorithm. This package contains examples to test qcat.
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Install this software package
If the package is available for the distribution you are currently using on your computer then install the software by clicking on…Install qcat-examples