r-bioc-isoformswitchanalyzer

Identify, Annotate and Visualize Alternative Splicing and

Description

Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data. Analysis of alternative splicing and isoform switches with predicted functional consequences (e.g. gain/loss of protein domains etc.) from quantification of all types of RNASeq by tools such as Kallisto, Salmon, StringTie, Cufflinks/Cuffdiff etc.

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Homepage

https://bioconductor.org/packages/IsoformSwitchAnalyzeR/


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