r-bioc-rgsepd

GNU R gene set enrichment / projection displays

Description

R/GSEPD is a bioinformatics package for R to help disambiguate transcriptome samples (a matrix of RNA-Seq counts at transcript IDs) by automating differential expression (with DESeq2), then gene set enrichment (with GOSeq), and finally a N-dimensional projection to quantify in which ways each sample is like either treatment group.

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Homepage

https://bioconductor.org/packages/rgsepd/


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