r-bioc-rsubread

Subread Sequence Alignment and Counting for R

Description

Alignment, quantification and analysis of second and third generation sequencing data. Includes functionality for read mapping, read counting, SNP calling, structural variant detection and gene fusion discovery.

Can be applied to all major sequencing techologies and to both short and long sequence reads.

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Homepage

https://bioconductor.org/packages/Rsubread/


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