r-bioc-rtracklayer

GNU R interface to genome browsers and their annotation tracks

Description

Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.

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Homepage

https://bioconductor.org/packages/rtracklayer/


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