GNU R client library for the WikiPathways API


WikiPathways is a well-known repository for biological pathways that provides unique tools to the research community for content creation, editing and utilization.

The package rWikiPathways leverages the WikiPathways API to communicate between GNU R and WikiPathways, allowing any pathway to be queried, interrogated and downloaded in both data and image formats. Queries are typically performed based on "Xrefs", standardized identifiers for genes, proteins and metabolites. Once you can identified a pathway, you can use the WPID (WikiPathways identifier) to make additional queries.

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Install r-bioc-rwikipathways