r-bioc-saturn

scalable analysis of differential transcript usage for RNA-sequencing

Description

This Bioconductor package can be used for Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing.

Applications satuRn provides a higly performant and scalable framework for performing differential transcript usage analyses. The package consists of three main functions. The first function, fitDTU, fits quasi-binomial generalized linear models that model transcript usage in different groups of interest. The second function, testDTU, tests for differential usage of transcripts between groups of interest. Finally, plotDTU visualizes the usage profiles of transcripts in groups of interest.

Upload more screenshots

Please help extend the collection of screenshots. Just make a screenshot and upload it here. You don't need to register or anything.

Upload a screenshot

Hint: upload an image here from your clipboard with Ctrl-V


Homepage

https://bioconductor.org/packages/satuRn/


Install this software package

If the package is available for the distribution you are currently using on your computer then install the software by clicking on…

Install r-bioc-saturn