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r-cran-adegenet

GNU R exploratory analysis of genetic and genomic data

Description

Toolset for the exploration of genetic and genomic data. Adegenet provides formal (S4) classes for storing and handling various genetic data, including genetic markers with varying ploidy and hierarchical population structure ('genind' class), alleles counts by populations ('genpop'), and genome-wide SNP data ('genlight'). It also implements original multivariate methods (DAPC, sPCA), graphics, statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.

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Homepage

https://cran.r-project.org/package=adegenet


Statistics

817 other people were interested in this package here. The newest known version of this software is 2.1.1-2+b1 (Information last updated about 13 hours ago.)