Advanced Data Analysis of Immune Receptor Repertoires
DescriptionCells of the immune system are the grand exception to the rule that all cells of an individuum have (mostly exact) copies of the same DNA. B cells (which produce antibodies) and T cells (which communicate with cells) however have a section of their DNA with genes of the groups V, D and J that are reorganised within the genomic DNA to provide the flexibility to deal with yet unknown pathogens. This package provides a platform for the advanced analysis of T cell receptor repertoire data and its visualisations. Caveat: This package is soon to be replaced by http://github.com/immunomind/immunarch which is not yet available as a Debian package.
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