tools for working with SAM/BAM data


Sambamba positions itself as a performant alternative to samtools and provides tools for
 * Powerful filtering with sambamba view --filter
 * Picard-like SAM header merging in the merge tool
 * Optional for operations on whole BAMs
 * Fast copying of a region to a new file with the slice tool
 * Duplicate marking/removal, using the Picard criteria

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