scoary

pangenome-wide association studies

Description

Scoary is designed to take the gene_presence_absence.csv file from Roary as well as a traits file created by the user and calculate the associations between all genes in the accessory genome and the traits. It reports a list of genes sorted by strength of association per trait.

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Homepage

https://github.com/AdmiralenOla/Scoary


Install this software package

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Install scoary