sepp

Description

The tool SEPP implementing these methods uses ensembles of Hidden Markov Models (HMMs) in different ways, each focusing on a different problem.

SEPP stands for "SATe-enabled Phylogenetic Placement", and addresses the problem of phylogenetic placement of short reads into reference alignments and trees.

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Homepage

https://github.com/smirarab/sepp/

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Install this software package

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Install sepp