Debian logoDebian Screenshots >

seqtk

Fast and lightweight tool for processing sequences in the FASTA or FASTQ format

Fast and lightweight tool for processing sequences in the FASTA or FASTQ format
from version 1.0-1

Description

Currently, seqtk supports quality based trimming with the phred algorithm, converting fastq to fasta, reverse complementing sequences, extracting or masking subsequences in regions given in a BED/name list file, and more. It contains a subsampling module to sample exactly n sequences or a fraction of sequences.

Seqtk supports both fasta and fastq input files, which can be optionally gzip compressed.

Upload more screenshots

Please help extend the collection of screenshots. Just make a screenshot and upload it here. You don't need to register or anything.


Homepage

https://github.com/lh3/seqtk


Statistics

1524 other people were interested in this package here. The newest known version of this software is 1.3-1 (Information last updated about 23 hours ago.)