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smithwaterman

determine similar regions between two strings or genomic sequences

Description

The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein sequences. Instead of looking at the total sequence, the Smith–Waterman algorithm compares segments of all possible lengths and optimizes the similarity measure.

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Homepage

https://github.com/ekg/smithwaterman


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553 other people were interested in this package here. The newest known version of this software is 0.0+git20160702.2610e25-7 (Information last updated 1 day ago.)