srst2

Short Read Sequence Typing for Bacterial Pathogens

Description

This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.

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Homepage

https://katholt.github.io/srst2/


Install this software package

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Install srst2