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tabix

generic indexer for TAB-delimited genome position files

generic indexer for TAB-delimited genome position files
from version 0.2.6-2

Description

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This version of tabix is built from the HTSlib source.

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Homepage

https://github.com/samtools/htslib


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236 other people were interested in this package here. The newest known version of this software is 1.3.2-1 (Information last updated about 19 hours ago.)