tophat
fast splice junction mapper for RNA-Seq reads
Description
TopHat aligns RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read aligner Bowtie, and then analyzes the mapping results to identify splice junctions between exons. TopHat is a collaborative effort between the University of Maryland Center for Bioinformatics and Computational Biology and the University of California, Berkeley Departments of Mathematics and Molecular and Cell Biology.Upload more screenshots
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Homepage
http://ccb.jhu.edu/software/tophat
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