RNA-Seq De novo Assembly common example and testing files
DescriptionTrinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-seq reads. Trinity partitions the sequence data into many individual de Bruijn graphs, each representing the transcriptional complexity at a given gene or locus, and then processes each graph independently to extract full-length splicing isoforms and to tease apart transcripts derived from paralogous genes. This package contains testing & example files.
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Install this software package
If the package is available for the distribution you are currently using on your computer then install the software by clicking on…Install trinityrnaseq-examples