twopaco

build the compacted de Bruijn graph from many complete genomes

Description

TwoPaCo is an implementation of the algorithm described in the paper "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes".

This package contains two programs:

 twopaco: tool for direct construction of the compressed graph from
          multiple complete genomes
 graphdump: utility that turns output of twopaco into a text format

Upload more screenshots

Please help extend the collection of screenshots. Just make a screenshot and upload it here. You don't need to register or anything.

Upload a screenshot

Hint: upload an image here from your clipboard with Ctrl-V


Homepage

https://github.com/medvedevgroup/TwoPaCo


Install this software package

If the package is available for the distribution you are currently using on your computer then install the software by clicking on…

Install twopaco