vt

toolset for short variant discovery in genetic sequence data

Description

vt is a variant tool set that discovers short variants from Next Generation Sequencing data.

Vt-normalize is a tool to normalize representation of genetic variants in the VCF. Variant normalization is formally defined as the consistent representation of genetic variants in an unambiguous and concise way. In vt a simple general algorithm to enforce this is implemented.

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Homepage

https://genome.sph.umich.edu/wiki/Vt


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Install vt