clang-tidy-12
clang-based C++ linter tool
Provide an extensible framework for diagnosing and fixing typical programming
errors, like style violations, interface misuse, or bugs that can be deduced
via static analysis. clang-tidy is modular and provides a convenient interface
for writing new checks.
cat-bat
taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
Contig Annotation Tool (CAT) and Bin Annotation Tool (BAT) are pipelines
for the taxonomic classification of long DNA sequences and metagenome
assembled genomes (MAGs/bins) of both known and (highly) unknown
microorganisms, as generated by contemporary metagenomics studies. The
core algorithm of both programs involves gene calling, mapping of
predicted ORFs against the nr protein database, and voting-based
classification of the entire contig / MAG based on classification of the
individual ORFs. CAT and BAT can be run from intermediate steps if files
are formatted appropriately.
bioperl
Perl tools for computational molecular biology
The Bioperl project is a coordinated effort to collect computational methods
routinely used in bioinformatics into a set of standard CPAN-style,
well-documented, and freely available Perl modules. It is well-accepted
throughout the community and used in many high-profile projects, e.g.,
Ensembl.
librte-raw-dpaa2-cmdif23
Data Plane Development Kit (librte-raw-dpaa2-cmdif runtime library)
DPDK is a set of libraries for fast packet processing. Applications run
in user-space and communicate directly with dedicated network interfaces.
librte-rawdev23
Data Plane Development Kit (librte-rawdev runtime library)
DPDK is a set of libraries for fast packet processing. Applications run
in user-space and communicate directly with dedicated network interfaces.