brig

BLAST Ring Image Generator

Description

BRIG can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data.

* Images show similarity between a central reference sequence and other

sequences as concentric rings.

* BRIG will perform all BLAST comparisons and file parsing automatically

via a simple GUI.

* Contig boundaries and read coverage can be displayed for draft genomes;

customized graphs and annotations can be displayed.

* Using a user-defined set of genes as input, BRIG can display gene

presence, absence, truncation or sequence variation in a set of

complete genomes, draft genomes or even raw, unassembled sequence data.

* BRIG also accepts SAM-formatted read-mapping files enabling genomic

regions present in unassembled sequence data from multiple samples to

be compared simultaneously

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