python-pbalign

map Pacific Biosciences reads to reference DNA sequences (Python2)

Description

pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format.

pbalign is part of the SMRTAnalysis suite. This package provides the Python library backend.

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Homepage

https://github.com/PacificBiosciences/pbalign


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Install python-pbalign