scrappie

basecaller for Nanopore sequencer

Description

The Nanopore is a device for DNA/RNA sequencing that does not require an amplification of the material. The polynucleotides are threaded through a pore and while these pass through, the change in the electrostatic potential allows one to identify ("call") the actual base that resides in the pore. Scrappie goes a step further and also attempts to describe modifications to the nucleic acid.

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Homepage

https://github.com/nanoporetech/scrappie


Install this software package

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Install scrappie

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