librte-net-e1000-23

Data Plane Development Kit (librte-net-e1000 runtime library)

DPDK is a set of libraries for fast packet processing. Applications run in user-space and communicate directly with dedicated network interfaces.

python3-loompy

access loom formatted files for bioinformatics

Loom is an efficient file format for very large omics datasets, consisting of a main matrix, optional additional layers, a variable number of row and column annotations. Loom also supports sparse graphs. Loom files are used to store single-cell gene expression data: the main matrix contains the actual expression values (one column per cell, one row per gene); row and column annotations contain metadata for genes and cells, such as Name, Chromosome, Position (for genes), and Strain, Sex, Age (for cells).

r-cran-dirmult

GNU R estimation in Dirichlet-Multinomial distribution

This GNU R package estimates parameters in Dirichlet-Multinomial and computes profile log-likelihoods.

python3-txi2p-tahoe

txi2p is a set of I2P bindings for Twisted

txi2p is a set of I2P bindings for Twisted 10.1 or greater. txi2p supports both the SAM and BOB APIs for I2P. The default API is SAM.

libstdc++-11-dev-mipsel-cross

GNU Standard C++ Library v3 (development files) (mipsel)

This package contains the headers and static library files necessary for building C++ programs which use libstdc++.

bioawk

extension of awk for biological sequence analysis

Bioawk is an extension to Brian Kernighan's awk, adding the support of several common biological data formats, including optionally gzip'ed BED, GFF, SAM, VCF, FASTA/Q and TAB-delimited formats with column names. It also adds a few built-in functions and an command line option to use TAB as the input/output delimiter. When the new functionality is not used, bioawk is intended to behave exactly the same as the original BWK awk.