r-cran-cmdfun

GNI R framework for building interfaces to shell commands

Writing interfaces to command line software is cumbersome. 'cmdfun' provides a framework for building function calls to seamlessly interface with shell commands by allowing lazy evaluation of command line arguments. 'cmdfun' also provides methods for handling user-specific paths to tool installs or secrets like API keys. Its focus is to equally serve package builders who wish to wrap command line software, and to help analysts stay inside R when they might usually leave to execute non- R software.

svn-buildpackage

helper programs to maintain Debian packages with Subversion

svn-buildpackage (formerly svn-devscripts) contains tools that help to automate the task of maintaining Debian packages inside of a Subversion repository. They are intended to be used by Debian maintainers to simplify the error-prone actions with the svn, devscripts, and dpkg-dev utilities.

lamassemble

Merges overlapping "long" DNA reads into a consensus sequences

lamassemble merges overlapping "long" DNA reads into a consensus sequence (i.e. assembles them). It works OK when the number of reads is less than a thousand or so. The merging is not always accurate. In particular, if the reads come from huge tandem repeats, wrong parts of the reads may get merged.

python3-xrt

XRay Tracer and wave propagation (Python 3)

XRayTracer is a python software library for ray tracing and wave propagation in x-ray regime. It is primarily meant for modeling synchrotron sources, beamlines and beamline elements. Includes a GUI for creating a beamline and interactively viewing it in 3D.

libtomcat9-embed-java

Apache Tomcat 9 - Servlet and JSP engine -- embed libraries

Apache Tomcat implements the Java Servlet and the JavaServer Pages (JSP) specifications from Oracle, and provides a "pure Java" HTTP web server environment for Java code to run.

libmodest0

pure C HTML renderer (library)

Modest is a fast HTML renderer implemented as a pure C99 library with no outside dependencies.