miniasm

ultrafast de novo assembler for long noisy DNA sequencing reads

Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.

libgeos-3.7.0

Geometry engine for Geographic Information Systems - C++ Library

cairo-5c

nickle bindings for the cairo graphics library

This package contains the nickle code to load and use the cairo-5c library, along with examples of how to use it and a simple toolkit, nichrome, which allows applications to build user interfaces entirely in nickle.

libui-utilcpp9-dbg

UI C++ utility library (debugging)

libqgisgrass8-3.22.14

QGIS - shared grass library

QGIS is a Geographic Information System (GIS) which manages, analyzes and display databases of geographic information.

r-cran-powerlaw

GNU R analysis of heavy tailed distributions

GNU R implementation of maximum likelihood estimators for a variety of heavy tailed distributions, including both the discrete and continuous power law distributions. Additionally, a goodness-of-fit based approach is used to estimate the lower cut-off for the scaling region.